Journal Article Stochastic Modelling for Systems Biology.Darren J. Wilkinson 2007 • Briefings in Bioinformatics • 8(3):204-205 Schwartz R
Journal Article Evaluating spatial constraints in cellular assembly processes using a Monte Carlo approach 2006 • Cell Biochemistry and Biophysics • 45(2):195-201 Puskar K, Ta'asan S, Schwartz R, LeDuc PR
Conference EXPECTATION-MAXIMIZATION METHOD FOR RECONSTRUCTING TUMOR PHYLOGENIES FROM SINGLE-CELL DATA 2006 371-380 Pennington G, Smith CA, Shackney S, Schwartz R
Journal Article Expectation-maximization method for reconstructing tumor phylogenies from single-cell data. 2006 • Computational systems bioinformatics / Life Sciences Society. Computational Systems Bioinformatics Conference • 371-380 Pennington G, Smith CA, Shackney S, Schwartz R
Conference Fixed parameter tractability of binary near-perfect phylogenetic tree reconstruction 2006 • Lecture Notes in Computer Science • 4051:667-678 Blelloch GE, Dhamdhere K, Halperin E, Ravi R, Schwartz R, Sridhar S
Journal Article Frequencies of hydrophobic and hydrophilic runs and alternations in proteins of known structure 2006 • Protein Science • 15(1):102-112 Schwartz R, King J
Journal Article HER2 expression as a potential marker for response to therapy targeted to the EGFR 2006 • British Journal of Cancer • 94(8):1144-1153 Emlet DR, Schwartz R, Brown KA, Pollice AA, Smith CA, Shackney SE
Conference OPTIMAL IMPERFECT PHYLOGENY RECONSTRUCTION AND HAPLOTYPING (IPPH) 2006 199-210 Sridhar S, Blelloch GE, Ravi R, Schwartz R
Journal Article Optimal imperfect phylogeny reconstruction and haplotyping (IPPH). 2006 • Computational systems bioinformatics / Life Sciences Society. Computational Systems Bioinformatics Conference • 199-210 Sridhar S, Blelloch GE, Ravi R, Schwartz R
Conference Rb dysfunctional breast cancers do not overexpress HER2, and their phenotype overlaps with that of basal-like breast cancers 2006 • Cancer Research • 66(8): Shackney SE, Emlet DR, Schwartz R, Pai S, Papasaikas P, Hu F, Janto B
Journal Article Relaxing haplotype block models for association testing. 2006 • Biocomputing • 454-466 Castellana N, Dhamdhere K, Sridhar S, Schwartz R
Conference Simple reconstruction of binary near-perfect phylogenetic trees 2006 • Lecture Notes in Computer Science • 3992:799-806 Sridhar S, Dhamdhere K, Blelloch GE, Halperin E, Ravi R, Schwartz R
Journal Article Simulation study of the contribution of oligomer/oligomer binding to capsid assembly kinetics 2006 • Biophysical Journal • 90(1):57-64 Zhang TQ, Schwartz R
Conference Implementation of a discrete event simulator for biological self-assembly systems 2005 • Proceedings of the ... Winter Simulation Conference. Winter Simulation Conference • 2223-2231 Zhang TQ, Rohlfs R, Schwartz R
Journal Article Local Rule Simulations of Capsid Assembly 2005 • Computational and Mathematical Methods in Medicine • 6(2):81-85 Schwartz R, Shor PW, Berger B
Journal Article Queue-based method for efficient simulation of biological self-assembly systems 2005 • Journal of Computational Physics • 204(1):100-120 Jamalyaria F, Rohlfs R, Schwartz R
Conference RELAXING HAPLOTYPE BLOCK MODELS FOR ASSOCIATION TESTING 2005 454-466 CASTELLANA N, DHAMDHERE K, SRIDHAR S, SCHWARTZ R
Conference Understanding molecular crowding effects on linear cytoskeleton assembly with reduced models 2005 • Biophysical Journal • 88(1):516A-516A Apeltsin L, Puskar K, LeDuc P, Schwartz R
Conference Algorithms for association study design using a generalized model haplotype conservation 2004 • Computational systems bioinformatics / Life Sciences Society. Computational Systems Bioinformatics Conference • 90-97 Schwartz R
Conference Algorithms for association study design using a generalized model of haplotype conservation 2004 • Proceedings - 2004 IEEE Computational Systems Bioinformatics Conference, CSB 2004 • 90-97 Schwartz R
Conference Bridging Mechanical Stimulation of Cellular and Molecular Structure Through Lattice Based Computational Simulations 2004 • Advances in Bioengineering, BED • 365-366 Puskar K, Apeltsin L, Ta’asan S, Schwartz R, LeDuc PR
Journal Article Comparative immunopeptidomics of humans and their pathogens 2004 • Proceedings of the National Academy of Sciences of the United States of America • 101(36):13268-13272 Istrail S, Florea L, Halldórsson BV, Kohlbacher O, Schwartz RS, Yap VB, Yewdell JW, Hoffman SL
Conference Inferring piecewise ancestral history from haploid sequences 2004 • Lecture Notes in Computer Science • 2983:62-73 Schwartz R, Clark AG, Istrail S
Conference Inferring Piecewise Ancestral History from Haploid Sequences 2004 • Lecture Notes in Computer Science • 2983:145-145 Schwartz R
